70+ Genomic Databases
VarSome offers a massive cross-referenced knowledge base consisting of 70+ genomic databases, representing over 33 billion data points. But there is more to it: whenever a public database is updated, VarSome processes it and makes it available to the whole genomics community for annotation and classification!
VarSome.com Resources: CGD, HGNC, Ensembl, RefSeq, UniGene, CIViC genes, dbSNP, GERP, ClinVar, IARC TP53 germline, IARC TP53 somatic, ICGC germline, ICGC somatic, Kaviar, gnomAD Exomes, gnomAD Genomes, DANN scores, CIViC mutations, HPO, UniProt variants, UniProt domains, GWAS Catalog, GHR, DGV, DECIPHER, ClinVar, ExAC CNVs, PanelApp, MONDO, PMKB, DOMINO, GDC, Bravo, MitoMap, SIFT, SIFT4G, PROVEAN, LRT, MutationTaster, MutationAssessor, FATHMM, fitCons, MetaSVM and MetaLR, Eigen & Eigen PC, M-CAP, REVEL, MutPred, MVP, MPC, PrimateAI, deogen2, ALoFT, phyloP, phastCons, bStatistic, GTEx, UniProt Genes, BioCarta Pathway, ConsensusPathDB, KEGG pathway, GDI, LoFTool, Essential genes, GHIS, RVIS, HIPred, P(HI) Score, P(rec) Score, GNF/Atlas Expressions, Gene Ontology.
Please note that with VarSome Clinical you can access proprietary and licensed datasets of some 3rd party data providers, although you still need to obtain a corresponding license. You can also import your own local database with allele frequencies and integrate it privately in your VarSome Clinical account for annotation and ACMG classification of your variants.
AACT, DGIdb, COSMIC, Polyphen-2, PharmGKB, CGD, HGNC, Ensembl, RefSeq, UniGene, CIViC genes, dbSNP, GERP, ClinVar, IARC TP53 germline, IARC TP53 somatic, ICGC germline, ICGC somatic, Kaviar, gnomAD Exomes, gnomAD Genomes, DANN scores, CIViC mutations, HPO, UniProt variants, UniProt domains, GWAS Catalog, GHR, DGV, DECIPHER, ClinVar, ExAC CNVs, PanelApp, MONDO, PMKB, DOMINO, GDC, Bravo, MitoMap, SIFT, SIFT4G, PROVEAN, LRT, MutationTaster, MutationAssessor, FATHMM, fitCons, MetaSVM and MetaLR, Eigen & Eigen PC, M-CAP, REVEL, MutPred, MVP, MPC, PrimateAI, deogen2, ALoFT, phyloP, phastCons, bStatistic, GTEx, UniProt Genes, BioCarta Pathway, ConsensusPathDB, KEGG pathway, GDI, LoFTool, Essential genes, GHIS, RVIS, HIPred, P(HI) Score, P(rec) Score, GNF/Atlas Expressions, Gene Ontology